The
Religious Affairs Minister Mohammad Ejaz ul-Haq's comments were widely seen as justifying suicide attacks because Sir Salman had insulted Islam.
But High Commissioner Robert Brinkley said it was untrue that the knighthood was intended to insult Islam.
Sir Salman's book The Satanic Verses sparked worldwide protests in 1989.
'Blasphemous book'
Mr Brinkley was summoned to the Pakistani foreign ministry in
A spokesman for Mr Brinkley said he "made clear the British government's deep concern at what the minister for religious affairs was reported to have said".
"The British government is very clear that nothing can justify suicide bomb attacks," the spokesman added.
Mr Brinkley was summoned so that
Mr Brinkley was told that the honor countered attempts by both countries to build mutual understanding.
The BBC's Barbara Plett in
There have been some street protests but only by small numbers of hard line Islamist activists.
A fatwa against Sir Salman was issued in 1989 in
Iranian conservatives on Tuesday criticized
"Salman Rushdie has turned into a hated corpse which cannot be resurrected by any action," First Deputy Speaker Mohammad Reza Bahonar told
"The action by the British Queen in knighting Salman Rushdie, the apostate, is an unwise one," he said to loud applause from MPs.
"The British monarch lives under this illusion that
Perceived blasphemy
On Monday Religious Affairs Minister Eijaz ul-Haq caused uproar in
"If someone commits suicide bombing to protect the honor of the Prophet Mohammad, his act is justified," he said, according to Reuters news agency.
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Sir Salman, 60, was one of almost 950 people to appear on the Queen's Birthday Honors list, which is aimed at recognising outstanding achievement.
The controversial Indian-born author's fourth book - The Satanic Verses in 1988 - describes a cosmic battle between good and evil and combines fantasy, philosophy and farce.
It was immediately condemned by the Islamic world because of its perceived blasphemous depiction of the Prophet Muhammad.
It was banned in many countries with large Muslim communities and in 1989 Ayatollah Khomeini,
In 1998, the Iranian government said it would no longer support the fatwa, but some groups have said it is irrevocable.
The following year, Sir Salman returned to public life.
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Protests against Salman Rushdie's knighthood in